• About RmiR

    RmiR is an R package for the analysis of microRNA and gene expression microarrays. The package is designed to coupling microRNA and gene expression data, using different databases, like TargetScan, mirBase, picTar,TarBase and others...

    Bibliography

  • Choose a vignette in the menu at the right of the book.

    RmiR is the core package

    RmiR.db contains some database of microRNA targets

  • RmiR Vignette Package

    RmiR is an R package for the analysis of microRNA and gene expression microarrays. The goal of this package is to couple microRNA and gene expression data (coming from the same RNA). We match miRNAs to corresponding gene targets using the criteria applied by different databases. The package uses various databases of microRNA targets from the RmiR.db package...

  • RmiR.db Vignette Package

    RmiR.db is an R package which includes various databases of miRNA targets:
    • mirBase
    • targetScan
    • miRanda from microrna.org
    • tarBase from Diana Labs
    • mirTarget2 from mirDB
    • picTar

  • SVG result of the coupling between miR and gene expression microarrays.

    Cliclk on the image to see it in details.

    SVG result of the coupling between miRNA and gene expression time course experiments.

    Cliclk on the image to see it in details.

  • SVG
  • SVG